HERVI (DF0000185)

Internal region of ERV1 endogenous retrovirus, HERVI subfamily

Description

HERVI is flanked by LTR10B long terminal repeats. Although none of the HERVI elements have retained long open reading frames, stretches with homology to various parts of the Moloney murine leukemia virus (Mo-MuLV) proteins were detected [1].

References

  1. Three independent insertions of retrovirus-like sequences in the haptoglobin gene cluster of primates.
    Maeda N, Kim HS;
    Genomics 1990;8:671-683 Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 7784 positions long. The average length of non-redundant hits to the model is 1521.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 117 7558 108 5035

External Database Links

  • Repbase : HERVI [Requires Repbase registration]