HERVH48 (DF0000184)

Internal region of ERV1 endogenous retrovirus, HERVH48 subfamily

Description

HERVH48 is flanked by MER48 LTRs. ORFs found in the reconstruction: Gag (~657-2237) and Pol + partial Env (~3927-6455).

Synonyms: HERVH48I

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 6654 positions long. The average length of non-redundant hits to the model is 1321.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 166 12145 146 10198

External Database Links

  • Repbase : HERVH48I [Requires Repbase registration]