HERV-Fc1 (DF0000176)

ERV1 endogenous retrovirus, HERV-Fc1 subfamily

Description

Apparently active after the split from orangutan [1].

References

  1. Characterization of the low-copy HERV-Fc family: evidence for recent integrations in primates of elements with coding envelope genes.
    Benit L, Calteau A, Heidmann T;
    Virology 2003;312:159-168. Pubmed

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class LTR Article
Superfamily ERV1 Article

Hit Statistics

The model is 4629 positions long. The average length of non-redundant hits to the model is 681.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 55 5740 19 2724

External Database Links

  • Repbase : HERV-Fc1 [Requires Repbase registration]