Internal region of an ERV1 endogenous retrovirus, HERV35I subfamily
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Internal sequence of an endogenous retrovirus with associated LTR35 LTRs. This is an ancient, non-autonomous LTR retrotransposon. The primer binding site is complementary to proline tRNA.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 6918 positions long. The average length of non-redundant hits to the model is 617.2. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : HERV35I [Requires Repbase registration]