Helitron3Na_Mam (DF0000160)

Helitron DNA transposon, Helitron3Na_Mam subfamily

Description

Helitrons are thought to transpose with a rolling circle mechanism, and represent a distinct class of DNA transposon. Helitron3Na_Mam represents a non-autonomous helitron fossil also found in other mammals, though it is not clearly similar to the other human helitron models.

References

  1. Helitrons on a roll: eukaryotic rolling-circle transposons.
    Kapitonov VV, Jurka J;
    Trends Genet 2007;23:521-529 Pubmed

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Rolling Circle
Superfamily Helitron Article

Hit Statistics

The model is 486 positions long. The average length of non-redundant hits to the model is 271.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 235 266 136 149
Homo sapiens 869 1269 742 1024

External Database Links