Eulor4 (DF0000129)

Eulor4 (Euteleostomi-conserved low frequency repeat 4)

Description

Putative DNA transposon (assignment unclear). Termini are not completely defined. Eulor4 contains four diverged, tandem, palindromic units. The full element probably continues like that. Found in Xenopus; >25 copies in human, ~40 in platypus, ~70 in alligator.

References

  1. Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica.
    Gentles AJ, Wakefield MJ, Kohany O, Gu W, Batzer MA, Pollock DD, Jurka J;
    Genome Res 2007;17:992-1004 Pubmed

  2. Repetitive sequences in complex genomes: structure and evolution.
    Jurka J, Kapitonov VV, Kohany O, Jurka MV;
    Annu Rev Genomics Hum Genet 2007;8:241-259 Pubmed

Classification

Accession Name Wikipedia
Type Unknown
Class Unknown
Superfamily Undefined

Hit Statistics

The model is 416 positions long. The average length of non-redundant hits to the model is 249.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 29 44 20 27
Homo sapiens 38 65 30 42

External Database Links