ERV1 retrotransposon, ERV24_Prim subfamily
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Endogenous element with LTR24 LTRs. ORFs: (roughly) gag 899-2224, pol 2228-5926, env 5961-7358. Pol product 78% similar to that of PRIMA4 and 69% similar to that of ERV8_MD. Env is 85% similar to that of PRIMA4.
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 7575 positions long. The average length of non-redundant hits to the model is 761.8. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
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