DNA1_Mam (DF0000113)

TcMar DNA transposon, DNA1_Mam subfamily (non-autonomous)

Description

Present in ~200 copies in human and other placental mammals. It has imperfect TIRs and putative TSDs (TA, included in consensus). The sequence is a near perfect hairpin.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily TcMar

Hit Statistics

The model is 407 positions long. The average length of non-redundant hits to the model is 236.5. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 36 69 32 56
Homo sapiens 105 279 99 264

External Database Links