Cheshire (DF0000109)

hAT-Charlie DNA transposon, Chesire subfamily (autonomous)

Description

16bp TIR, 8bp TSD.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 2420 positions long. The average length of non-redundant hits to the model is 305.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 357 6194 237 2800
Homo sapiens 1508 41745 1361 24371

External Database Links

  • Repbase : CHESHIRE [Requires Repbase registration]