Charlie25 (DF0000102)

hAT-Charlie DNA transposon, Charlie25 subfamily (autonomous)

Description

14 bp TIR. Complete ORF (roughly 384-2366) encodes a transposase closest to that of Charlie3 (44% identical, 62% similar).

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 2524 positions long. The average length of non-redundant hits to the model is 527.1. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 232 336 161 205
Homo sapiens 629 2484 493 1224

External Database Links

  • Repbase : Charlie25 [Requires Repbase registration]