Charlie23a (DF0000100)

hAT-Charlie DNA transposon, Charlie23a subfamily (non-autonomous)


Charlie23a has 16bp TIRs. The TIR sequence is shared with Charlie18a, and similar to that of Charlie15a and Charlie21a. Present in marsupials; absent from platypus.


Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 339 positions long. The average length of non-redundant hits to the model is 228.4. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 253 435 114 128
Homo sapiens 1485 2199 1107 1497

External Database Links

None recorded for this entry