Charlie12 (DF0000085)

hAT-Charlie DNA transposon, Charlie12 subfamily (autonomous)

Description

A largely internally deleted Charlie12 is the source of MER30 elements.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 2870 positions long. The average length of non-redundant hits to the model is 142.3. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 42 1867 20 892
Homo sapiens 243 7692 234 7414

External Database Links

  • Repbase : Charlie12 [Requires Repbase registration]