Charlie11 (DF0000084)

hAT-Charlie DNA transposon, Charlie11 subfamily

Description

Incomplete termini. Very short TIRs; ends tough but TSD bias clear.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 2196 positions long. The average length of non-redundant hits to the model is 620.2. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 16 21 14 17
Homo sapiens 64 180 54 94

External Database Links

  • Repbase : Charlie11 [Requires Repbase registration]