BC200 (DF0000073)
Alu-related SINE/putative ncRNA gene
Description
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
5' end derives from Alu, middle is A-rich, 3' region unique to BC200.
References
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Primary structure, neural-specific expression, and dendritic location of human BC200 RNA.
Tiedge H, Chen W, Brosius J;
J Neurosci 1993;13:2382-2390 Pubmed
Classification
| Accession | Name | Wikipedia |
|---|---|---|
| Type | Retrotransposon | Article |
| Class | SINE | |
| Superfamily | Alu | Article |
Hit Statistics
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 145 positions long. The average length of non-redundant hits to the model is 124.6. This table shows the number of hits above score thresholds:
| Species | Gathering | Trusted | ||
|---|---|---|---|---|
| non-redundant | all hits | non-redundant | all hits | |
| Homo sapiens | 1300 | 2201833 | 1016 | 2130984 |
External Database Links
None recorded for this entry