hAT-Tip100 DNA transposon, Arthur1 subfamily
A brief description of the entry. Suggestions for modification to this description can be submitted using the adjacent pencil icon.
Arthur1 has 8 bp TSDs and 11 bp TIRs. A complete ORF (~1150-3711) encodes a transposase related to that of the Tip100-group of DNA transposons. Note that MER69C is an incomplete reconstruction of an autonomous hAT-family DNA transposon related to MER45 and Zaphod. Arthur1 is a more complete reconstruction.
|Class||Cut and Paste|
Number of matches to this model that meet the "Gathering" threshold and more stringent "Trusted" threshold. For each threshold, two numbers are shown: (1) the number of matches to this model after removing redundant hits to other models ("non-redundant"), and (2) the total number of matches above threshold, including those with better scoring matches to other models ("all hits").
The model is 3947 positions long. The average length of non-redundant hits to the model is 484. This table shows the number of hits above score thresholds:
|non-redundant||all hits||non-redundant||all hits|
External Database Links
- Repbase : MER69C [Requires Repbase registration]