AluYc3 (DF0000058)

AluYc3 subfamily

Description

Alu elements derive from a pair of internally-deleted 7SL RNA monomers that are joined by an A-rich linker. AluYc2, AluYc3, and AluYd3a1 are identical. Naming convention suggests AluYc2 is preferred, as seq differs from AluY at 2 positions.

Synonyms: AluYc2; AluYd3a1

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class SINE
Superfamily Alu Article

Hit Statistics

The model is 300 positions long. The average length of non-redundant hits to the model is 205.7. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 1017 1271619 951 1230067

External Database Links

  • Repbase : AluYc2 [Requires Repbase registration]