AluJo (DF0000034)

AluJo subfamily

Description

Alu elements derive from a pair of internally-deleted 7SL RNA monomers that are joined by an A-rich linker. This element is described in "Origin and evolution of Alu repetitive elements", by Jurka J., in Molecular Biology Intelligence Unit:The impact of short interspersed elements (SINEs) on the host genome (ed. Richard J. Maraia), R.G.Landes Company, Austin, pp.25-41 (1995).

Synonyms: ALU

Classification

Accession Name Wikipedia
Type Retrotransposon Article
Class SINE
Superfamily Alu Article

Hit Statistics

The model is 312 positions long. The average length of non-redundant hits to the model is 265.8. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Homo sapiens 28834 1258869 28750 1241639

External Database Links

  • Repbase : AluJo [Requires Repbase registration]