Charlie2b (DF0000020)

hAT-Charlie DNA transposon, Charlie2b

Description

15-16bp TIR; 8bp TSD. Charlie2b is an alternative internal deletion product of this superfamily.

Classification

Accession Name Wikipedia
Type DNA Transposon Article
Class Cut and Paste
Superfamily hAT-Charlie

Hit Statistics

The model is 2782 positions long. The average length of non-redundant hits to the model is 405. This table shows the number of hits above score thresholds:

Species Gathering Trusted
non-redundant all hits non-redundant all hits
Mus musculus 510 1328 327 721
Homo sapiens 1462 5136 1287 4212

External Database Links

  • Repbase : CHARLIE2B [Requires Repbase registration]